Protein identification and sequencing
From raw-data processing to Mascot-searching, Proteome Consult offers expert data evaluation of ESI-MS-, Maldi-MS-, MS/MS- and Edman data.
Protein identification by analysis of MALDI MS-fingerprinting data can be performed starting from different stages of data processing. Refined mass lists may be either provided by the customer or assembled by Proteome Consult from unprocessed mass lists or MALDI-TOF-spectra according to specified criteria.
Within the framework of an analytical project raw data analysis can be performed for the Bruker Reflex/Ultraflex-series instruments.
Protein sequences can be obtained from Edman-chromatograms, as well as from ESI-MS/MS- or MALDI-PSD-spektra. Within the framework of an analytical project ESI MS/MS or MALDI post scource decay data can be analyzed using raw-data of Micromass Q-TOF series and Bruker Reflex/Ultraflex-series instruments.
Mascot searches will be done in cooperation with a partner company bound by a confidentiality agreement, if required to address customer needs.
Software for data analysis
Proteome Consult can offer to develop software (Visual Basic, Perl, PHP) for customer specific data processing needs, please inquire.
Data may be submitted on CD-ROM, DVD, CompactFlash® card, MicroDrive® or may be made available for download on a website. Matched databases will be returned on media according to customer needs. Please specify your preferred storage medium. If no storage medium is specified, matched databases will be send on CD-ROM. All customer data will be treated as strictly confidential.
CompactFlash® is a registered Trademark of SanDisk Corp., Sunnyvale (USA)
MicroDrive® is a registered Trademark of Hitachi Global Storage Technologies, San José (USA)